Package: SSP 1.0.1

SSP: Simulated Sampling Procedure for Community Ecology

Simulation-based sampling protocol (SSP) is an R package design to estimate sampling effort in studies of ecological communities based on the definition of pseudo-multivariate standard error (MultSE) (Anderson & Santana-Garcon, 2015) <doi:10.1111/ele.12385> and simulation of ecological data. The theoretical background is described in Guerra-Castro et al. (2020) <doi:10.1101/2020.03.19.996991>.

Authors:Edlin Guerra-Castro [aut, cre], Maite Mascaro [aut], Nuno Simoes [aut], Juan Cruz-Motta [aut], Juan Cajas [aut]

SSP_1.0.1.tar.gz
SSP_1.0.1.zip(r-4.5)SSP_1.0.1.zip(r-4.4)SSP_1.0.1.zip(r-4.3)
SSP_1.0.1.tgz(r-4.4-any)SSP_1.0.1.tgz(r-4.3-any)
SSP_1.0.1.tar.gz(r-4.5-noble)SSP_1.0.1.tar.gz(r-4.4-noble)
SSP_1.0.1.tgz(r-4.4-emscripten)SSP_1.0.1.tgz(r-4.3-emscripten)
SSP.pdf |SSP.html✨
SSP/json (API)

# Install 'SSP' in R:
install.packages('SSP', repos = c('https://edlinguerra.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/edlinguerra/ssp/issues

Datasets:
  • epibionts - Epibionts on Caribbean mangrove roots
  • micromollusk - Micromollusks of marine shallow sandy bottoms around Cayo Nuevo, Gulf of Mexico, Mexico
  • pilot - Epibionts on Caribbean mangrove roots: pilot data
  • sponges - Sponges in Alacranes Reef National Park (ARNP), Gulf of Mexico, Mexico

On CRAN:

7 exports 2 stars 5.78 score 33 dependencies 1 dependents 81 mentions 9 scripts 141 downloads

Last updated 4 years agofrom:ec6b3d6191. Checks:OK: 5 NOTE: 2. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 24 2024
R-4.5-winNOTEAug 24 2024
R-4.5-linuxNOTEAug 24 2024
R-4.4-winOKAug 24 2024
R-4.4-macOKAug 24 2024
R-4.3-winOKAug 24 2024
R-4.3-macOKAug 24 2024

Exports:assempardatqualityioptimumplot_sspsampsdsimdatasummary_ssp

Dependencies:cliclustercolorspacefansifarverggplot2gluegtableisobandlabelinglatticelifecyclelpSolvemagrittrMASSMatrixmgcvmunsellnlmepermutepillarpkgconfigR6RColorBrewerrlangsamplingscalestibbleutf8vctrsveganviridisLitewithr

Estimation of sampling effort in community ecology with SSP

Edlin Guerra-Castro, Juan Carlos Cajas, Juan José Cruz-Motta, Nuno Simoes and Maite Mascaro

Rendered fromSSP-guide.Rmdusingknitr::rmarkdownon Aug 24 2024.

Last update: 2020-03-22
Started: 2019-11-08