Package: SSP 1.0.1

SSP: Simulated Sampling Procedure for Community Ecology

Simulation-based sampling protocol (SSP) is an R package design to estimate sampling effort in studies of ecological communities based on the definition of pseudo-multivariate standard error (MultSE) (Anderson & Santana-Garcon, 2015) <doi:10.1111/ele.12385> and simulation of ecological data. The theoretical background is described in Guerra-Castro et al. (2020) <doi:10.1101/2020.03.19.996991>.

Authors:Edlin Guerra-Castro [aut, cre], Maite Mascaro [aut], Nuno Simoes [aut], Juan Cruz-Motta [aut], Juan Cajas [aut]

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SSP.pdf |SSP.html✨
SSP/json (API)

# Install 'SSP' in R:
install.packages('SSP', repos = c('https://edlinguerra.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/edlinguerra/ssp/issues

Datasets:
  • epibionts - Epibionts on Caribbean mangrove roots
  • micromollusk - Micromollusks of marine shallow sandy bottoms around Cayo Nuevo, Gulf of Mexico, Mexico
  • pilot - Epibionts on Caribbean mangrove roots: pilot data
  • sponges - Sponges in Alacranes Reef National Park (ARNP), Gulf of Mexico, Mexico

On CRAN:

5.48 score 2 stars 1 packages 9 scripts 151 downloads 81 mentions 7 exports 33 dependencies

Last updated 5 years agofrom:ec6b3d6191. Checks:OK: 5 NOTE: 2. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 22 2024
R-4.5-winNOTENov 22 2024
R-4.5-linuxNOTENov 22 2024
R-4.4-winOKNov 22 2024
R-4.4-macOKNov 22 2024
R-4.3-winOKNov 22 2024
R-4.3-macOKNov 22 2024

Exports:assempardatqualityioptimumplot_sspsampsdsimdatasummary_ssp

Dependencies:cliclustercolorspacefansifarverggplot2gluegtableisobandlabelinglatticelifecyclelpSolvemagrittrMASSMatrixmgcvmunsellnlmepermutepillarpkgconfigR6RColorBrewerrlangsamplingscalestibbleutf8vctrsveganviridisLitewithr

Estimation of sampling effort in community ecology with SSP

Edlin Guerra-Castro, Juan Carlos Cajas, Juan José Cruz-Motta, Nuno Simoes and Maite Mascaro

Rendered fromSSP-guide.Rmdusingknitr::rmarkdownon Nov 22 2024.

Last update: 2020-03-22
Started: 2019-11-08